Differences in sex development (DSD) are a diverse group of conditions where the chromosomal, gonadal or anatomical sex can be atypical.
How to order genomic testing for differences in sex development (DSD)
This page provides information for healthcare professionals on how to request non-NHS genomic testing for differences in sex development (DSD) . For NHS tests, please visit the relevant pages here.
Step by step instructions
About differences in sex development (DSD)
Differences in sex development (DSD) are a diverse group of conditions where the chromosomal, gonadal or anatomical sex can be atypical. DSDs are caused either by disruption of sex differentiation due to defects in hormone production/sensitivity, or by alterations in the pathway responsible for determining gonadal development.
Test code and gene information
NHSE test directory code: R146 Differences in sex development.
The DSD panel contains genes involved in gonadal development and gonadal differentiation (PanelApp v2.1, January 2020)
| Disorders of gonadal development | ||
| Gene | Associated phenotypes | OMIM |
| ARX | Proud syndrome (Corpus Callosum, Agenesis Of, With Abnormal Genitalia)
X-linked Lissencephaly type 2 |
300004 |
| ATRX | X-linked Alpha-thalassemia/mental retardation syndrome | 301040 |
| CUL4B | X-linked intellectual disability, Cabezas type | 300354 |
| DHH | 46,XY complete gonadal dysgenesis (46,XY sex reversal type 7)
46,XY gonadal dysgenesis-motor and sensory neuropathy syndrome |
233420 |
| MAMLD1 | X-linked Hypospadias type 2
X-linked myotubular myopathy-abnormal genitalia syndrome |
300758 |
| MAP3K1 | 46,XY complete gonadal dysgenesis (46,XY sex reversal type 6) 46,XY partial gonadal dysgenesis | 613762 |
| NR0B1 | 46,XY sex reversal type 2
Congenital Adrenal Hypoplasia |
300018 |
| NR5A1 | 46,XX sex reversal type 4
46,XY sex reversal type 3 Adrenocortical insufficiency/Premature Ovarian Failure type 7 Spermatogenic failure type 8 |
617480 |
| RPL10 | Syndromic X-linked intellectual disability | 300998 |
| RSPO1 | Palmoplantar hyperkeratosis with squamous cell carcinoma of skin and sex reversal | 610644 |
| SOX9 | Campomelic dysplasia | 114290 |
| SOX10 | Peripheral demyelinating neuropathy, Central dysmyelination, Waardenburg syndrome, and Hirschsprung disease (PCWH)
Waardenburg syndrome, type 4C |
609136
|
| SRY | 46,XX sex reversal type 1
46,XY sex reversal type 1 |
400045 400044 |
| TOE1 | Pontocerebellar hypoplasia, type 7 | 614969 |
| WT1 | Denys-Drash syndrome
Frasier syndrome |
194080 |
| Disorders of gonadal differentiation | ||
| Gene | Associated phenotypes | OMIM |
| AMH | Persistent Mullerian duct syndrome type 1 | 261550 |
| AMHR2 | Persistent Mullerian duct syndrome type 2 | 261550 |
| AR | Androgen insensitivity
X-linked Hypospadias type 1 |
300068 |
| CDKN1C | IMAGE syndrome | 614732 |
| CHD7 | CHARGE syndrome
Hypogonadotropic hypogonadism type 5 |
214800
612370 |
| CYB5A | Methemoglobinemia and ambiguous genitalia | 250790 |
| CYP11A1 | Congenital adrenal insufficiency with 46,XY sex reversal | 613743 |
| CYP11B1 | Adrenal hyperplasia, congenital, due to 11-beta-hydroxylase deficiency
Glucocorticoid-remediable aldosteronism |
202010 |
| CYP17A1 | 46,XY disorder of sex development due to isolated 17,20-lyase deficiency | 202110 |
| CYP19A1 | Aromatase excess syndrome | 139300 |
| CYP21A2* | Congenital adrenal hyperplasia due to 21-hydroxylase deficiency | 201910 |
| DHCR7 | Smith-Lemli-Opitz syndrome | 270400 |
| HSD17B3 | 46,XY disorder of sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency | 264300 |
| HSD3B2 | Congenital adrenal hyperplasia due to 3-beta-hydroxysteroid dehydrogenase 2 deficiency | 201810 |
| LHCGR | Leydig cell hypoplasia due to complete LH resistance | 238320 |
| POR | Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis | 201750 |
| SAMD9 | MIRAGE syndrome | 617053 |
| SGPL1 | Nephrotic syndrome type 14 | 617575 |
| SRD5A2 | 46,XY disorder of sex development due to 5-alpha-reductase 2 deficiency | 264600 |
| STAR | Lipoid adrenal hyperplasia | 201710 |
*Due to the presence of pseudogenes with very high sequence similarity, mapping of reads over this gene is suboptimal. If a diagnosis of Congenital Adrenal Hyperplasia due to 21-hydroxylase deficiency (CAH) is suspected please request additional testing (Sanger sequencing and copy number analysis by MLPA).
Eligibility
Eligibility criteria for genomic tests can be found in the National Genomic Test Directory.
This lists the clinical specialties that would be expected to request for a given clinical indication and sets out which patients should be considered for testing.
Test order form
All samples for genomic testing should be accompanied by a fully completed request form.
The request form should include as much clinical information about the patient or family member, family relationships and the requested test code (R number). All request forms must indicate either a specific disorder/gene(s) to be investigated or, a request to extract and store DNA.
This form should be used for the majority of test requests.
Please do not download and store this on your desktop or system. The form is regularly updated. Our recommendation is to save or bookmark a link to our website to ensure you are working with the most up-do-date version.
Download the latest version here: GMS Test Order Form v2.3
Consent
An appropriate discussion of genomic testing and the possible implications for a patient and their family members must take place before testing is requested.
It is the referring clinician’s responsibility to ensure that the patient/carer knows the purpose of the test and that the sample may be stored for future diagnostic testing. In submitting a sample with a request form, the clinician confirms that informed consent has been obtained for (a) testing and storage (indefinitely) (b) the use of this sample and the information generated from it to be shared with members of the donor’s family and their health professionals (if appropriate). The patient should be advised that the samples may be used anonymously for quality assurance and training purposes.
If stated as a requirement for a specific test, a record of this discussion must be retained within the patient record when a genomic test is ordered.
For more information please view the Consent and Confidentiality in Genomic Medicine guidelines from the Joint Committee on Medical Genetics.
Samples and transport
Before sending samples for genomic testing, please ensure you follow the correct preparation and transport guidelines. This includes information on sample types, volumes, handling, labelling, and packaging standards.
For a full list of sample requirements and transport guidance, please visit the samples and transport page of the website.
Results and turnaround times
Turnaround times (TATs) for genomic tests are continually refined through ongoing reviews of testing standards.
Results will be returned to the email account or clinician listed on the request form.
The laboratory participates in the European Molecular Genetics Quality Network (EMQN) sequencing scheme.